If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ), 'gf_id' => 'HOM05D000528', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000528' ), 'data_identifier' => 'HOM05D000528', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000528', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1033', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p03180' => 'bna', 'A04p01370' => 'bna', 'A04p12250' => 'bna', 'A06p09980' => 'bna', 'A06p26630' => 'bna', 'A07p20020' => 'bna', 'A10p20100' => 'bna', 'Aa31LG10G15090' => 'aar', 'Aa31LG1G1050' => 'aar', 'Aa31LG1G11290' => 'aar', 'Aa31LG1G8700' => 'aar', 'Aa31LG2G7230' => 'aar', 'Aa31LG4G12930' => 'aar', 'Aa31LG6G12380' => 'aar', 'Aa31LG6G16910' => 'aar', 'Aa31LG9G16530' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2536' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2707' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2708' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.2712' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.394' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.395' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.3510' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_262.3' => 'aag', 'Actinidia12265' => 'ach', 'Actinidia17565' => 'ach', 'Actinidia26235' => 'ach', 'Actinidia26325' => 'ach', 'Actinidia31416' => 'ach', 'Actinidia32003' => 'ach', 'Actinidia32004' => 'ach', 'Actinidia32687' => 'ach', 'Actinidia33225' => 'ach', 'Actinidia33226' => 'ach', 'Actinidia33511' => 'ach', 'Actinidia33512' => 'ach', 'Actinidia39603' => 'ach', 'Ah.01g016930' => 'amhyb', 'Ah.01g017710' => 'amhyb', 'Ah.03g134700' => 'amhyb', 'Ah.12g061350' => 'amhyb', 'AL1G10360' => 'aly', 'AL1G25820' => 'aly', 'AL1G41750' => 'aly', 'AL5G21370' => 'aly', 'AL5G43180' => 'aly', 'AL6G31120' => 'aly', 'AL7G10100' => 'aly', 'AL7G15780' => 'aly', 'AL7G47210' => 'aly', 'AL7G50810' => 'aly', 'Aqoxy4G02481' => 'aox', 'Aqoxy4G02488' => 'aox', 'Aqoxy5G01765' => 'aox', 'Aqoxy6G00264' => 'aox', 'Aqoxy6G02695' => 'aox', 'Aqoxy6G02996' => 'aox', 'Aqoxy7G00597' => 'aox', 'Aqoxy7G03760' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0PS9LV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.35ZMHK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3JG7A2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6U6KXT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9EA0XY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A3UPJU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV2QSX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CYEA0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I95U6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JF9XSQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MVE1KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PIMS1B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RG5BSU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V729I7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VJJ8D8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VY6U2V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W1RKBH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XCTP1G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z2MV1Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZQK7BT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZYZ781' => 'arhy', 'AT1G01960' => 'ath', 'AT1G13980' => 'ath', 'AT3G43300' => 'ath', 'AT3G60860' => 'ath', 'AT4G35380' => 'ath', 'AT4G38200' => 'ath', 'AT5G19610' => 'ath', 'AT5G39500' => 'ath', 'ATR0006G069' => 'atr', 'ATR0584G143' => 'atr', 'ATR0584G148' => 'atr', 'ATR0584G158' => 'atr', 'ATR0584G206' => 'atr', 'ATR0605G087' => 'atr', 'ATR0605G297' => 'atr', 'ATR0665G621' => 'atr', 'ATR0810G017' => 'atr', 'Atru.BG.16.p' => 'acertr', 'Atru.chr11.1720' => 'acertr', 'Atru.chr5.321' => 'acertr', 'Atru.chr5.3581' => 'acertr', 'Atru.chr5.3584' => 'acertr', 'Atru.chr7.1325' => 'acertr', 'Atru.chr7.1801' => 'acertr', 'Atru.chr7.1802' => 'acertr', 'Atru.chr7.1803' => 'acertr', 'Atru.chr7.1804' => 'acertr', 'Atru.chr8.325' => 'acertr', 'AUR62004225' => 'cqu', 'AUR62005846' => 'cqu', 'AUR62010209' => 'cqu', 'AUR62011009' => 'cqu', 'AUR62013198' => 'cqu', 'AUR62013623' => 'cqu', 'AUR62020271' => 'cqu', 'AUR62021520' => 'cqu', 'AUR62022449' => 'cqu', 'AUR62023914' => 'cqu', 'AUR62032838' => 'cqu', 'AUR62037731' => 'cqu', 'AUR62038332' => 'cqu', 'AUR62039320' => 'cqu', 'BcaB02g07979' => 'bca', 'BcaB02g10779' => 'bca', 'BcaB05g23398' => 'bca', 'BcaB06g27317' => 'bca', 'BcaB06g27338' => 'bca', 'BcaC01g02206' => 'bca', 'BcaC02g10193' => 'bca', 'BcaC04g24223' => 'bca', 'BcaC04g24224' => 'bca', 'BcaC05g25294' => 'bca', 'BcaC07g42347' => 'bca', 'BcaC08g44418' => 'bca', 'BcaNung00598' => 'bca', 'BcaNung00599' => 'bca', 'BcaNung00600' => 'bca', 'BcaNung01999' => 'bca', 'BNapus_Darmor_BZH_scaffold_146p00040' => 'bna', 'BolC1t00342H' => 'bol', 'BolC4t24721H' => 'bol', 'BolC4t26176H' => 'bol', 'BolC5t29920H' => 'bol', 'BolC6t37069H' => 'bol', 'BolC7t46797H' => 'bol', 'BolC8t52910H' => 'bol', 'BolC9t58522H' => 'bol', 'BolSC21t60253H' => 'bol', 'BraA01t00303Z' => 'bra', 'BraA04t15857Z' => 'bra', 'BraA04t16889Z' => 'bra', 'BraA06t24184Z' => 'bra', 'BraA06t25597Z' => 'bra', 'BraA06t27780Z' => 'bra', 'BraA07t29701Z' => 'bra', 'BraA09t42272Z' => 'bra', 'BraA10t44084Z' => 'bra', 'C01p03530' => 'bna', 'C03p67850' => 'bna', 'C04p31720' => 'bna', 'C04p45930' => 'bna', 'C05p11740' => 'bna', 'C06p18560' => 'bna', 'C08p53970' => 'bna', 'C09p56570' => 'bna', 'CAN.G112.25' => 'can', 'CAN.G130.2' => 'can', 'CAN.G1645.12' => 'can', 'CAN.G184.57' => 'can', 'CAN.G206.178' => 'can', 'CAN.G241.26' => 'can', 'CAN.G243.13' => 'can', 'CAN.G243.14' => 'can', 'CAN.G31.16' => 'can', 'CAN.G31.17' => 'can', 'CAN.G31.18' => 'can', 'CAN.G348.7' => 'can', 'CAN.G38.24' => 'can', 'CAN.G388.2' => 'can', 'CAN.G398.5' => 'can', 'CAN.G488.20' => 'can', 'CAN.G79.1' => 'can', 'CAN.G798.48' => 'can', 'CAN.G8.14' => 'can', 'CAN.G964.28' => 'can', 'CANSAT21G0716' => 'cansat', 'CANSAT25G0393' => 'cansat', 'CANSAT56G0585' => 'cansat', 'CANSAT56G3986' => 'cansat', 'CANSAT56G4206' => 'cansat', 'CANSAT56G4237' => 'cansat', 'CARHR000390' => 'chi', 'CARHR014350' => 'chi', 'CARHR064710' => 'chi', 'CARHR153370' => 'chi', 'CARHR171250' => 'chi', 'CARHR243700' => 'chi', 'CARHR262830' => 'chi', 'CARHR293970' => 'chi', 'Carub.0001s0028' => 'cru', 'Carub.0001s1367' => 'cru', 'Carub.0005s0916' => 'cru', 'Carub.0006s1796' => 'cru', 'Carub.0007s0009' => 'cru', 'Carub.0007s0493' => 'cru', 'Carub.0007s3647' => 'cru', 'Carub.0008s0950' => 'cru', 'Ca_05869_v3' => 'car', 'Ca_06507_v3' => 'car', 'Ca_07825_v3' => 'car', 'Ca_08183_v3' => 'car', 'Ca_08184_v3' => 'car', 'Ca_21350_v3' => 'car', 'Ca_23846_v3' => 'car', 'Ca_25521_v3' => 'car', 'CBR_g19322' => 'cbr', 'CBR_g5727' => 'cbr', 'CBR_g8287' => 'cbr', 'Cc02_g36590' => 'ccan', 'Cc06_g09520' => 'ccan', 'Cc07_g03650' => 'ccan', 'Cc09_g04400' => 'ccan', 'Cc09_g10920' => 'ccan', 'Cc11_g12600' => 'ccan', 'Cc11_g12610' => 'ccan', 'CDE02G2972' => 'cde', 'CDE03G0135' => 'cde', 'CDE03G0144' => 'cde', 'CDE04G0103' => 'cde', 'CDE04G0269' => 'cde', 'CDE04G0509' => 'cde', 'CDE04G3191' => 'cde', 'CDE05G0957' => 'cde', 'CDE05G1718' => 'cde', 'CDE05G1826' => 'cde', 'CDE05G2175' => 'cde', 'CDE05G2741' => 'cde', 'CDE05G3140' => 'cde', 'CDE06G0788' => 'cde', 'CDE06G1665' => 'cde', 'CDE06G1912' => 'cde', 'CDE06G2617' => 'cde', 'CDE07G1894' => 'cde', 'CDE11G0558' => 'cde', 'Cfa001430' => 'cfa', 'Cfa003276' => 'cfa', 'Cfa005397' => 'cfa', 'Cfa007592' => 'cfa', 'Cfa009486' => 'cfa', 'Cfa021584' => 'cfa', 'Cfa024722' => 'cfa', 'Cfa025764' => 'cfa', 'Cfa027356' => 'cfa', 'Ciclev10007246m.g' => 'ccl', 'Ciclev10010624m.g' => 'ccl', 'Ciclev10010904m.g' => 'ccl', 'Ciclev10018463m.g' => 'ccl', 'Ciclev10027671m.g' => 'ccl', 'Ciclev10030502m.g' => 'ccl', 'Ciclev10033125m.g' => 'ccl', 'CiPaw.01G261100' => 'cil', 'CiPaw.01G291000' => 'cil', 'CiPaw.02G166800' => 'cil', 'CiPaw.03G233900' => 'cil', 'CiPaw.04G014600' => 'cil', 'CiPaw.05G095100' => 'cil', 'CiPaw.05G095200' => 'cil', 'CiPaw.06G113900' => 'cil', 'CiPaw.08G000100' => 'cil', 'ClCG02G003230' => 'cla', 'ClCG05G002160' => 'cla', 'ClCG05G002580' => 'cla', 'ClCG07G003560' => 'cla', 'ClCG11G002530' => 'cla', 'COL.COLO4_03851' => 'col', 'COL.COLO4_12228' => 'col', 'COL.COLO4_12559' => 'col', 'COL.COLO4_21179' => 'col', 'COL.COLO4_27976' => 'col', 'COL.COLO4_34896' => 'col', 'Cpa.g.c29182.2' => 'cpa', 'Cpa.g.c40566' => 'cpa', 'Cpa.g.c48111' => 'cpa', 'Cpa.g.sc1.65' => 'cpa', 'Cpa.g.sc14.120' => 'cpa', 'Cpa.g.sc14.121' => 'cpa', 'Cpa.g.sc18.121' => 'cpa', 'Cpa.g.sc23.116' => 'cpa', 'Cpa.g.sc232.8' => 'cpa', 'Cpa.g.sc82.32' => 'cpa', 'Cpa.g.sc82.33' => 'cpa', 'Cpa.g.sc82.34' => 'cpa', 'Cpa.g.sc82.36' => 'cpa', 'Cpa.g.sc82.37' => 'cpa', 'Cre03.g172150' => 'cre', 'Cre07.g334100' => 'cre', 'Cre09.g390319' => 'cre', 'CsaV3_2G002330' => 'csa', 'CsaV3_3G009610' => 'csa', 'CsaV3_3G010020' => 'csa', 'CsaV3_3G031710' => 'csa', 'CsaV3_5G008330' => 'csa', 'CsaV3_7G002160' => 'csa', 'CSS0002571' => 'camsi', 'CSS0007186' => 'camsi', 'CSS0010183' => 'camsi', 'CSS0016389' => 'camsi', 'CSS0027335' => 'camsi', 'CSS0031605' => 'camsi', 'CSS0036188' => 'camsi', 'CSS0038336' => 'camsi', 'CSS0040076' => 'camsi', 'CSS0041872' => 'camsi', 'CSS0048094' => 'camsi', 'DCAR_005426' => 'dca', 'DCAR_005427' => 'dca', 'DCAR_006872' => 'dca', 'DCAR_011077' => 'dca', 'DCAR_011871' => 'dca', 'DCAR_014955' => 'dca', 'DCAR_014959' => 'dca', 'DCAR_023798' => 'dca', 'DCAR_027484' => 'dca', 'DCAR_028721' => 'dca', 'Dinv00072' => 'din', 'Dinv01230' => 'din', 'Dinv11504' => 'din', 'Dinv14186' => 'din', 'Dinv14187' => 'din', 'Dinv21582' => 'din', 'Dinv21583' => 'din', 'Dinv25491' => 'din', 'Dinv32382' => 'din', 'Dinv39093' => 'din', 'Dinv39094' => 'din', 'Dinv41589' => 'din', 'Dinv42440' => 'din', 'Dinv43721' => 'din', 'Duzib052G1203' => 'dzi', 'Duzib132G0712' => 'dzi', 'Duzib133G0584' => 'dzi', 'Duzib138G0174' => 'dzi', 'Duzib147G0726' => 'dzi', 'Duzib150G0943' => 'dzi', 'Duzib150G1295' => 'dzi', 'Duzib168G1392' => 'dzi', 'Duzib168G2182' => 'dzi', 'Duzib248G0286' => 'dzi', 'Duzib248G0733' => 'dzi', 'ECA233G2528' => 'eca', 'ECA234G1681' => 'eca', 'ECA234G2762' => 'eca', 'ECA234G4174' => 'eca', 'ECA236G3024' => 'eca', 'ECA236G4864' => 'eca', 'ECA238G2036' => 'eca', 'ECA240G2217' => 'eca', 'ECA246G4212' => 'eca', 'ECA248G1999' => 'eca', 'EL10Ac1g00906' => 'bvu', 'EL10Ac2g02401' => 'bvu', 'EL10Ac6g13263' => 'bvu', 'EL10Ac8g18513' => 'bvu', 'EL10Ac9g21127' => 'bvu', 'EL10Ac9g21558' => 'bvu', 'Eucgr.B03196' => 'egr', 'Eucgr.C00756' => 'egr', 'Eucgr.C03862' => 'egr', 'Eucgr.E01413' => 'egr', 'Eucgr.I01543' => 'egr', 'FAN01G0475' => 'fan', 'FAN01G0563' => 'fan', 'FAN01G1447' => 'fan', 'FAN01G2114' => 'fan', 'FAN01G2388' => 'fan', 'FAN01G3058' => 'fan', 'FAN03G0325' => 'fan', 'FAN03G0833' => 'fan', 'FAN03G0967' => 'fan', 'FAN03G2295' => 'fan', 'FAN05G1157' => 'fan', 'FAN05G2268' => 'fan', 'FAN06G0044' => 'fan', 'FAN06G0175' => 'fan', 'FAN06G1312' => 'fan', 'FAN06G1446' => 'fan', 'FAN06G3409' => 'fan', 'FAN06G3597' => 'fan', 'FAN06G3643' => 'fan', 'FAN06G5100' => 'fan', 'FAN07G0579' => 'fan', 'FAN07G1582' => 'fan', 'FAN08G1210' => 'fan', 'FAN08G2458' => 'fan', 'FAN10G0017' => 'fan', 'FAN10G1792' => 'fan', 'FAN10G2181' => 'fan', 'FAN10G2806' => 'fan', 'FAN10G3426' => 'fan', 'FAN15G2552' => 'fan', 'FAN19G0743' => 'fan', 'FAN19G1221' => 'fan', 'FAN20G0047' => 'fan', 'FAN22G1052' => 'fan', 'FAN23G0785' => 'fan', 'FAN23G1517' => 'fan', 'FAN23G1603' => 'fan', 'FAN24G2253' => 'fan', 'FAN26G0098' => 'fan', 'FAN26G1955' => 'fan', 'FAN26G2632' => 'fan', 'FAN26G3208' => 'fan', 'FAN27G0212' => 'fan', 'FAN27G2043' => 'fan', 'FAN28G2663' => 'fan', 'FAN28G2848' => 'fan', 'FvH4_1g05140' => 'fve', 'FvH4_1g09670' => 'fve', 'FvH4_2g17050' => 'fve', 'FvH4_7g07780' => 'fve', 'FvH4_7g12020' => 'fve', 'FvH4_7g21960' => 'fve', 'FvH4_7g22150' => 'fve', 'FvH4_7g22980' => 'fve', 'FvH4_7g22990' => 'fve', 'Glyma.01G144200' => 'gma', 'Glyma.02G250000' => 'gma', 'Glyma.02G312200' => 'gma', 'Glyma.03G022900' => 'gma', 'Glyma.09G189000' => 'gma', 'Glyma.09G268400' => 'gma', 'Glyma.11G221800' => 'gma', 'Glyma.11G221900' => 'gma', 'Glyma.13G115800' => 'gma', 'Glyma.14G000300' => 'gma', 'Glyma.14G066600' => 'gma', 'Glyma.17G044000' => 'gma', 'Glyma.18G035700' => 'gma', 'Glyma.18G035800' => 'gma', 'Glyma.18G221200' => 'gma', 'Glyma.18G221400' => 'gma', 'Glyma.18G221500' => 'gma', 'Gohir.A03G170000' => 'ghi', 'Gohir.A04G111200' => 'ghi', 'Gohir.A04G140600' => 'ghi', 'Gohir.A05G022300' => 'ghi', 'Gohir.A05G037300' => 'ghi', 'Gohir.A05G368850' => 'ghi', 'Gohir.A07G018300' => 'ghi', 'Gohir.A08G031500' => 'ghi', 'Gohir.A08G133600' => 'ghi', 'Gohir.A08G133701' => 'ghi', 'Gohir.A09G013266' => 'ghi', 'Gohir.A11G081300' => 'ghi', 'Gohir.A12G012500' => 'ghi', 'Gohir.A13G064133' => 'ghi', 'Gohir.D02G193100' => 'ghi', 'Gohir.D04G046500' => 'ghi', 'Gohir.D04G151500' => 'ghi', 'Gohir.D04G190850' => 'ghi', 'Gohir.D04G190951' => 'ghi', 'Gohir.D05G023800' => 'ghi', 'Gohir.D05G038800' => 'ghi', 'Gohir.D07G018100' => 'ghi', 'Gohir.D08G042600' => 'ghi', 'Gohir.D08G154800' => 'ghi', 'Gohir.D09G011900' => 'ghi', 'Gohir.D11G085900' => 'ghi', 'Gohir.D12G012850' => 'ghi', 'Gohir.D12G012901' => 'ghi', 'Gohir.D12G012951' => 'ghi', 'Gohir.D12G013000' => 'ghi', 'Gohir.D13G057801' => 'ghi', 'Gorai.001G018700' => 'gra', 'Gorai.004G041200' => 'gra', 'Gorai.004G160900' => 'gra', 'Gorai.005G215900' => 'gra', 'Gorai.006G013900' => 'gra', 'Gorai.007G091700' => 'gra', 'Gorai.008G013100' => 'gra', 'Gorai.009G023900' => 'gra', 'Gorai.009G039300' => 'gra', 'Gorai.012G051700' => 'gra', 'Gorai.012G138200' => 'gra', 'Gorai.012G186300' => 'gra', 'Gorai.013G065100' => 'gra', 'GSVIVG01013109001' => 'vvi', 'GSVIVG01014993001' => 'vvi', 'GSVIVG01015408001' => 'vvi', 'GSVIVG01023854001' => 'vvi', 'GSVIVG01027623001' => 'vvi', 'HanXRQChr01g0017721' => 'han', 'HanXRQChr04g0113981' => 'han', 'HanXRQChr04g0122311' => 'han', 'HanXRQChr06g0181951' => 'han', 'HanXRQChr07g0199661' => 'han', 'HanXRQChr09g0245771' => 'han', 'HanXRQChr12g0355451' => 'han', 'HanXRQChr13g0425191' => 'han', 'HanXRQChr14g0455161' => 'han', 'HanXRQChr15g0473151' => 'han', 'HanXRQChr16g0521011' => 'han', 'HanXRQChr16g0521611' => 'han', 'HanXRQChr17g0545941' => 'han', 'Haze_01521' => 'cav', 'Haze_01955' => 'cav', 'Haze_08747' => 'cav', 'Haze_13463' => 'cav', 'Haze_14498' => 'cav', 'Haze_16826' => 'cav', 'Haze_17113' => 'cav', 'Haze_21237' => 'cav', 'Haze_21238' => 'cav', 'Haze_23777' => 'cav', 'Haze_25700' => 'cav', 'Hma1.2p1_0112F.1_g054720' => 'hma', 'Hma1.2p1_0179F.1_g079070' => 'hma', 'Hma1.2p1_0179F.1_g079080' => 'hma', 'Hma1.2p1_0518F.1_g171290' => 'hma', 'Hma1.2p1_0719F.1_g208520' => 'hma', 'Hma1.2p1_1607F.1_g293410' => 'hma', 'HPP92_001571' => 'vpl', 'HPP92_001572' => 'vpl', 'HPP92_001579' => 'vpl', 'HPP92_002719' => 'vpl', 'HPP92_012348' => 'vpl', 'HPP92_012349' => 'vpl', 'HPP92_015831' => 'vpl', 'HPP92_020666' => 'vpl', 'HPP92_021916' => 'vpl', 'HPP92_021917' => 'vpl', 'Hund00101' => 'sun', 'Hund00753' => 'sun', 'Hund05864' => 'sun', 'Hund06351' => 'sun', 'Hund11560' => 'sun', 'Hund17011' => 'sun', 'Hund27352' => 'sun', 'Lalb_Chr03g0039411' => 'lal', 'Lalb_Chr04g0246891' => 'lal', 'Lalb_Chr04g0251041' => 'lal', 'Lalb_Chr04g0251051' => 'lal', 'Lalb_Chr07g0181491' => 'lal', 'Lalb_Chr07g0189711' => 'lal', 'Lalb_Chr10g0107731' => 'lal', 'Lalb_Chr12g0200411' => 'lal', 'Lalb_Chr12g0208321' => 'lal', 'Lalb_Chr14g0371441' => 'lal', 'Lalb_Chr15g0084571' => 'lal', 'Lalb_Chr18g0053091' => 'lal', 'Lalb_Chr19g0127291' => 'lal', 'Lj1A1154G40' => 'lonja', 'Lj1g0015849' => 'lja', 'Lj2C104G13' => 'lonja', 'Lj2C104T12' => 'lonja', 'Lj2g0020151' => 'lja', 'Lj3A749T131' => 'lonja', 'Lj3A749T133' => 'lonja', 'Lj3C717T6' => 'lonja', 'Lj3C718T0' => 'lonja', 'Lj3g0007955' => 'lja', 'Lj4g0008783' => 'lja', 'Lj5C170G20' => 'lonja', 'Lj6g0010613' => 'lja', 'Lj6g0018647' => 'lja', 'Lj7A647T56' => 'lonja', 'Lj7C527G9' => 'lonja', 'Lj8C559T8' => 'lonja', 'Lj9A409G88' => 'lonja', 'Lj9C571G3' => 'lonja', 'LjContig00081g0024847' => 'lja', 'LjContig00141g0001737' => 'lja', 'LjContig00141g0007952' => 'lja', 'Lsat_1_v5_gn_1_84121' => 'lsa', 'Lsat_1_v5_gn_2_89281' => 'lsa', 'Lsat_1_v5_gn_3_132520' => 'lsa', 'Lsat_1_v5_gn_3_99741' => 'lsa', 'Lsat_1_v5_gn_4_38961' => 'lsa', 'Lsat_1_v5_gn_4_40140' => 'lsa', 'Lsat_1_v5_gn_5_100720' => 'lsa', 'Lsat_1_v5_gn_5_11360' => 'lsa', 'Lsat_1_v5_gn_5_183521' => 'lsa', 'Lsat_1_v5_gn_7_7460' => 'lsa', 'Lsat_1_v5_gn_8_119540' => 'lsa', 'Lsat_1_v5_gn_8_63421' => 'lsa', 'Manes.01G032600' => 'mes', 'Manes.01G032800' => 'mes', 'Manes.01G265100' => 'mes', 'Manes.02G049000' => 'mes', 'Manes.03G019000' => 'mes', 'Manes.03G054900' => 'mes', 'Manes.03G096700' => 'mes', 'Manes.05G044300' => 'mes', 'Manes.15G114000' => 'mes', 'Manes.16G088500' => 'mes', 'Mapoly0003s0171' => 'mpo', 'Mapoly0030s0155' => 'mpo', 'Mapoly0100s0023' => 'mpo', 'MBI01_g11792_MAGBIO' => 'mbi', 'MBI01_g28405_MAGBIO' => 'mbi', 'MBI01_g45164_MAGBIO' => 'mbi', 'MBI01_g45165_MAGBIO' => 'mbi', 'MBI01_g45166_MAGBIO' => 'mbi', 'MBI01_g45167_MAGBIO' => 'mbi', 'MBI01_g45168_MAGBIO' => 'mbi', 'MBI01_g45169_MAGBIO' => 'mbi', 'MBI01_g45170_MAGBIO' => 'mbi', 'MBI04_g32242_MAGBIO' => 'mbi', 'MBI05_g03446_MAGBIO' => 'mbi', 'MBI13_g05971_MAGBIO' => 'mbi', 'MCO03G088' => 'mco', 'MCO04G496' => 'mco', 'MCO15G640' => 'mco', 'MD01G1138600' => 'mdo', 'MD01G1138700' => 'mdo', 'MD02G1050300' => 'mdo', 'MD02G1105600' => 'mdo', 'MD02G1202100' => 'mdo', 'MD02G1202200' => 'mdo', 'MD05G1143400' => 'mdo', 'MD07G1123200' => 'mdo', 'MD07G1202800' => 'mdo', 'MD07G1202900' => 'mdo', 'MD07G1203000' => 'mdo', 'MD10G1143300' => 'mdo', 'MD15G1187600' => 'mdo', 'MD15G1187700' => 'mdo', 'MD15G1187800' => 'mdo', 'MD15G1187900' => 'mdo', 'MD15G1225500' => 'mdo', 'Medtr3g068130' => 'mtr', 'Medtr3g068140' => 'mtr', 'Medtr4g124430' => 'mtr', 'Medtr5g080650' => 'mtr', 'Medtr5g099310' => 'mtr', 'Medtr6g086260' => 'mtr', 'Medtr7g075030' => 'mtr', 'Medtr8g036080' => 'mtr', 'Medtr8g466020' => 'mtr', 'MELO3C004551.2' => 'cme', 'MELO3C006181.2' => 'cme', 'MELO3C006224.2' => 'cme', 'MELO3C012923.2' => 'cme', 'MELO3C015692.2' => 'cme', 'MELO3C023883.2' => 'cme', 'Migut.B01643' => 'egut', 'Migut.B01644' => 'egut', 'Migut.F01825' => 'egut', 'Migut.F02072' => 'egut', 'Migut.H00675' => 'egut', 'Migut.I00641' => 'egut', 'Migut.L01245' => 'egut', 'Migut.N01366' => 'egut', 'MSTRG.16960' => 'ama', 'MSTRG.17200' => 'ama', 'MSTRG.20755' => 'ama', 'MSTRG.27425' => 'ama', 'MSTRG.27607' => 'ama', 'MSTRG.3029' => 'ama', 'MSTRG.7779' => 'ama', 'MSTRG.8180' => 'ama', 'Nitab4.5_0000014g0180' => 'nta', 'Nitab4.5_0000212g0110' => 'nta', 'Nitab4.5_0000219g0110' => 'nta', 'Nitab4.5_0000391g0250' => 'nta', 'Nitab4.5_0000413g0170' => 'nta', 'Nitab4.5_0000457g0380' => 'nta', 'Nitab4.5_0001220g0130' => 'nta', 'Nitab4.5_0001220g0140' => 'nta', 'Nitab4.5_0001572g0010' => 'nta', 'Nitab4.5_0001591g0130' => 'nta', 'Nitab4.5_0002993g0060' => 'nta', 'Nitab4.5_0004690g0060' => 'nta', 'Nitab4.5_0006028g0020' => 'nta', 'Nitab4.5_0008700g0010' => 'nta', 'Nitab4.5_0009851g0010' => 'nta', 'Nitab4.5_0010283g0030' => 'nta', 'Nitab4.5_0016469g0010' => 'nta', 'Nn1g00121' => 'nnu', 'Nn1g01203' => 'nnu', 'Nn2g11812' => 'nnu', 'Nn2g12522' => 'nnu', 'Nn2g12525' => 'nnu', 'Nn4g26427' => 'nnu', 'Nn5g31050' => 'nnu', 'Nn6g31501' => 'nnu', 'Nn8g40209' => 'nnu', 'Oeu005778.2' => 'oeu', 'Oeu007685.1' => 'oeu', 'Oeu015789.1' => 'oeu', 'Oeu016760.1' => 'oeu', 'Oeu020667.2' => 'oeu', 'Oeu025016.1' => 'oeu', 'Oeu035936.1' => 'oeu', 'Oeu036441.1' => 'oeu', 'Oeu037910.1' => 'oeu', 'Oeu051545.1' => 'oeu', 'Oeu062025.1' => 'oeu', 'Oeu062026.1' => 'oeu', 'Os02g0193800' => 'osa', 'Os02g0326600' => 'osa', 'Os03g0246800' => 'osa', 'Os03g0613100' => 'osa', 'Os03g0666100' => 'osa', 'Os04g0117300' => 'osa', 'Os06g0622800' => 'osa', 'Os07g0564700' => 'osa', 'Os07g0564750' => 'osa', 'Peaxi162Scf00006g03411' => 'pax', 'Peaxi162Scf00021g01518' => 'pax', 'Peaxi162Scf00166g01031' => 'pax', 'Peaxi162Scf00187g01013' => 'pax', 'Peaxi162Scf00222g00234' => 'pax', 'Peaxi162Scf00362g00022' => 'pax', 'Peaxi162Scf00560g00025' => 'pax', 'Peaxi162Scf00629g00114' => 'pax', 'PGR042G1274' => 'pgr', 'PGR102G0887' => 'pgr', 'PGR102G3236' => 'pgr', 'PGR119G0784' => 'pgr', 'PGR142G1496' => 'pgr', 'PGR142G3048' => 'pgr', 'PGSC0003DMG400001432' => 'stu', 'PGSC0003DMG400007651' => 'stu', 'PGSC0003DMG400012771' => 'stu', 'PGSC0003DMG400014671' => 'stu', 'PGSC0003DMG400028343' => 'stu', 'Phvul.001G235300' => 'pvu', 'Phvul.001G235400' => 'pvu', 'Phvul.003G126000' => 'pvu', 'Phvul.004G161900' => 'pvu', 'Phvul.008G075600' => 'pvu', 'Phvul.008G231400' => 'pvu', 'Phvul.008G293100' => 'pvu', 'Phvul.010G085000' => 'pvu', 'Potri.002G149200' => 'ptr', 'Potri.004G208400' => 'ptr', 'Potri.006G216900' => 'ptr', 'Potri.009G169800' => 'ptr', 'Potri.014G070600' => 'ptr', 'Potri.017G078800' => 'ptr', 'Potri.017G078900' => 'ptr', 'Potri.018G075300' => 'ptr', 'Pp3c11_12270' => 'ppa', 'Pp3c15_11320' => 'ppa', 'Pp3c18_8290' => 'ppa', 'Pp3c18_8720' => 'ppa', 'Pp3c18_8730' => 'ppa', 'Pp3c21_11888' => 'ppa', 'Pp3c21_11890' => 'ppa', 'Pp3c21_11900' => 'ppa', 'Pp3c21_11910' => 'ppa', 'Pp3c21_12020' => 'ppa', 'Pp3c21_12080' => 'ppa', 'Pp3c22_6150' => 'ppa', 'Pp3c3_16100' => 'ppa', 'Pp3c3_16110' => 'ppa', 'Pp3c3_32910' => 'ppa', 'Pp3c5_16650' => 'ppa', 'Pp3c5_6990' => 'ppa', 'Pp3c7_14180' => 'ppa', 'Pp3c8_19790' => 'ppa', 'Pp3c9_11830' => 'ppa', 'PRCOL_00002400' => 'pco', 'PRCOL_00002619' => 'pco', 'PRCOL_00003162' => 'pco', 'PRCOL_00003539' => 'pco', 'Prupe.2G146800' => 'ppe', 'Prupe.2G239100' => 'ppe', 'Prupe.2G239200' => 'ppe', 'Prupe.7G189500' => 'ppe', 'Prupe.7G228800' => 'ppe', 'Prupe.8G182200' => 'ppe', 'Psat0s1294g0200' => 'psa', 'Psat0s3334g0040' => 'psa', 'Psat0s3984g0040' => 'psa', 'Psat1g040480' => 'psa', 'Psat1g202480' => 'psa', 'Psat2g000400' => 'psa', 'Psat2g093320' => 'psa', 'Psat3g033040' => 'psa', 'Psat3g033200' => 'psa', 'Psat3g115480' => 'psa', 'Psat4g020000' => 'psa', 'Psat4g195280' => 'psa', 'Psat5g081080' => 'psa', 'Psat7g186560' => 'psa', 'PSO017G0622' => 'pso', 'PSO017G2681' => 'pso', 'PSO063G1188' => 'pso', 'PSO170G1988' => 'pso', 'PSO339G5044' => 'pso', 'PSO384G1812' => 'pso', 'PSO478G0292' => 'pso', 'PSO541G5174' => 'pso', 'PSO675G2635' => 'pso', 'PSO675G4154' => 'pso', 'PSO782G2443' => 'pso', 'PSO782G2518' => 'pso', 'QL02p084892' => 'qlo', 'QL03p049169' => 'qlo', 'QL08p052116' => 'qlo', 'QL08p061162' => 'qlo', 'QL11p056832' => 'qlo', 'RcHm_v2.0_Chr1g0350731' => 'rch', 'RcHm_v2.0_Chr1g0368181' => 'rch', 'RcHm_v2.0_Chr1g0368191' => 'rch', 'RcHm_v2.0_Chr2g0090771' => 'rch', 'RcHm_v2.0_Chr2g0090781' => 'rch', 'RcHm_v2.0_Chr2g0096511' => 'rch', 'RcHm_v2.0_Chr2g0130521' => 'rch', 'RcHm_v2.0_Chr2g0138841' => 'rch', 'RcHm_v2.0_Chr3g0474641' => 'rch', 'RcHm_v2.0_Chr4g0419081' => 'rch', 'RcHm_v2.0_Chr4g0419091' => 'rch', 'RcHm_v2.0_Chr4g0442741' => 'rch', 'RcHm_v2.0_Chr5g0020911' => 'rch', 'RcHm_v2.0_Chr6g0280331' => 'rch', 'RcHm_v2.0_Chr6g0280591' => 'rch', 'RcHm_v2.0_Chr6g0281231' => 'rch', 'RcHm_v2.0_Chr6g0281241' => 'rch', 'RcHm_v2.0_Chr6g0298981' => 'rch', 'RcHm_v2.0_Chr7g0225111' => 'rch', 'RcHm_v2.0_Chr7g0242311' => 'rch', 'Rhsim02G0256800' => 'rsi', 'Rhsim02G0256900' => 'rsi', 'Rhsim03G0244100' => 'rsi', 'Rhsim05G0000600' => 'rsi', 'Rhsim05G0000700' => 'rsi', 'Rhsim05G0000800' => 'rsi', 'Rhsim05G0125400' => 'rsi', 'Rhsim05G0125500' => 'rsi', 'Rhsim07G0026500' => 'rsi', 'Rhsim08G0072200' => 'rsi', 'Rhsim10G0094900' => 'rsi', 'Sabra02G0117900' => 'sbr', 'Sabra04G0140400' => 'sbr', 'Sabra06G0124900' => 'sbr', 'Sabra06G0167300' => 'sbr', 'Sabra09G0131600' => 'sbr', 'Sabra17G0069900' => 'sbr', 'Sabra17G0070000' => 'sbr', 'Sabra18G0066200' => 'sbr', 'SalBow1G0700' => 'sbo', 'SalBow1G1474' => 'sbo', 'SalBow1G3759' => 'sbo', 'SalBow2G3514' => 'sbo', 'SalBow3G2418' => 'sbo', 'SalBow5G0378' => 'sbo', 'SalBow5G2253' => 'sbo', 'SalBow5G3559' => 'sbo', 'SalBow5G4354' => 'sbo', 'SalBow7G0484' => 'sbo', 'Sc02g0002530' => 'sci', 'Sc03g0004600' => 'sci', 'Sc04g0001650' => 'sci', 'Sc04g0007880' => 'sci', 'Sc08g0002030' => 'sci', 'Sc08g0002040' => 'sci', 'Sc18g0001130' => 'sci', 'Sed0002065' => 'sed', 'Sed0005609' => 'sed', 'Sed0012879' => 'sed', 'Sed0014114' => 'sed', 'Sed0014503' => 'sed', 'Sed0018294' => 'sed', 'Sed0019498' => 'sed', 'Sed0020334' => 'sed', 'Sed0023409' => 'sed', 'SEGI_07724' => 'sgi', 'SEGI_17076' => 'sgi', 'SEGI_20405' => 'sgi', 'SEGI_22051' => 'sgi', 'SEGI_27033' => 'sgi', 'SEGI_30958' => 'sgi', 'SEGI_35405' => 'sgi', 'SGA_v2.0_scaffold122G33228' => 'sas', 'SGA_v2.0_scaffold13G06349' => 'sas', 'SGA_v2.0_scaffold153G37022' => 'sas', 'SGA_v2.0_scaffold3062G54265' => 'sas', 'SGA_v2.0_scaffold37G14653' => 'sas', 'SGA_v2.0_scaffold413G51174' => 'sas', 'SGA_v2.0_scaffold455G51912' => 'sas', 'SGA_v2.0_scaffold80G25807' => 'sas', 'SGA_v2.0_scaffold98G29311' => 'sas', 'SHI05799' => 'shi', 'SHI07737' => 'shi', 'SHI09191' => 'shi', 'SHI13518' => 'shi', 'SHI13519' => 'shi', 'SHI13520' => 'shi', 'SHI26919' => 'shi', 'SHI26921' => 'shi', 'SHI27961' => 'shi', 'SHI27962' => 'shi', 'SMO116G0004' => 'smo', 'SMO126G0009' => 'smo', 'SMO143G0024' => 'smo', 'SMO144G0125' => 'smo', 'SMO149G0004' => 'smo', 'SMO174G0134' => 'smo', 'SMO175G0008' => 'smo', 'SMO197G0082' => 'smo', 'SMO265G0051' => 'smo', 'SMO298G0060' => 'smo', 'SMO347G0425' => 'smo', 'SMO364G0794' => 'smo', 'Solyc01g091460.3' => 'sly', 'Solyc01g112340.3' => 'sly', 'Solyc01g112350.3' => 'sly', 'Solyc02g067010.3' => 'sly', 'Solyc02g088290.4' => 'sly', 'Solyc03g070470.1' => 'sly', 'Solyc04g005560.3' => 'sly', 'Solyc05g013040.3' => 'sly', 'Solyc12g017830.3' => 'sly', 'Sopen01g037200' => 'spe', 'Sopen01g054440' => 'spe', 'Sopen02g016200' => 'spe', 'Sopen02g016300' => 'spe', 'Sopen02g032980' => 'spe', 'Sopen03g019250' => 'spe', 'Sopen04g001600' => 'spe', 'Sopen05g007810' => 'spe', 'Sopen12g008630' => 'spe', 'Sp1g00340' => 'spa', 'Sp1g12340' => 'spa', 'Sp5g02390' => 'spa', 'Sp5g17840' => 'spa', 'Sp6g24780' => 'spa', 'Sp7g02460' => 'spa', 'Sp7g33170' => 'spa', 'Sp7g37550' => 'spa', 'TAR362G0147' => 'tar', 'TAR362G0862' => 'tar', 'TAR371G1085' => 'tar', 'TAR374G0122' => 'tar', 'TAR381G1720' => 'tar', 'TAR626G1794' => 'tar', 'TAR629G2009' => 'tar', 'TAR629G2957' => 'tar', 'TAR629G3338' => 'tar', 'TAR636G0580' => 'tar', 'THA.LOC104799071' => 'tha', 'THA.LOC104799601' => 'tha', 'THA.LOC104804077' => 'tha', 'THA.LOC104805485' => 'tha', 'THA.LOC104810976' => 'tha', 'THA.LOC104814085' => 'tha', 'THA.LOC104817251' => 'tha', 'THA.LOC104819698' => 'tha', 'THA.LOC104823043' => 'tha', 'THA.LOC104824072' => 'tha', 'Thecc.01G375000' => 'tca', 'Thecc.02G148200' => 'tca', 'Thecc.02G339700' => 'tca', 'Thecc.04G087600' => 'tca', 'Thecc.09G067600' => 'tca', 'Thecc.09G112700' => 'tca', 'Thhalv10002369m.g' => 'esa', 'Thhalv10005735m.g' => 'esa', 'Thhalv10006576m.g' => 'esa', 'Thhalv10009179m.g' => 'esa', 'Thhalv10009607m.g' => 'esa', 'Thhalv10012445m.g' => 'esa', 'Thhalv10024199m.g' => 'esa', 'Thhalv10024200m.g' => 'esa', 'Thhalv10027619m.g' => 'esa', 'TPR.G12643' => 'tpr', 'TPR.G18631' => 'tpr', 'TPR.G21736' => 'tpr', 'TPR.G22893' => 'tpr', 'TPR.G26932' => 'tpr', 'TPR.G26953' => 'tpr', 'TPR.G2873' => 'tpr', 'TPR.G30576' => 'tpr', 'TWI23G0774' => 'twi', 'TWI34G0172' => 'twi', 'TWI34G0608' => 'twi', 'TWI34G0978' => 'twi', 'TWI34G1986' => 'twi', 'TWI59G0018' => 'twi', 'TWI60G1157' => 'twi', 'TWI63G0826' => 'twi', 'TWI75G1645' => 'twi', 'TWI79G1344' => 'twi', 'unitig_0.g1091' => 'ugi', 'unitig_22.g5378' => 'ugi', 'unitig_22.g5379' => 'ugi', 'unitig_22.g5380' => 'ugi', 'unitig_699.g19737' => 'ugi', 'unitig_699.g19738' => 'ugi', 'unitig_699.g19739' => 'ugi', 'unitig_736.g22237' => 'ugi', 'unitig_736.g22501' => 'ugi', 'unitig_748.g8067' => 'ugi', 'unitig_748.g8068' => 'ugi', 'unitig_749.g13216' => 'ugi', 'vmacro05427' => 'vma', 'vmacro05428' => 'vma', 'vmacro06203' => 'vma', 'vmacro06377' => 'vma', 'vmacro06378' => 'vma', 'vmacro10880' => 'vma', 'vmacro13391' => 'vma', 'vmacro18172' => 'vma', 'vmacro18173' => 'vma', 'vmacro20882' => 'vma', 'VMungo0331G0143' => 'vmu', 'VMungo0331G0524' => 'vmu', 'VMungo0331G1379' => 'vmu', 'VMungo0464G1860' => 'vmu', 'VMungo0647G0119' => 'vmu', 'VMungo0647G0389' => 'vmu', 'VMungo0647G0627' => 'vmu', 'VMungo0647G1493' => 'vmu', 'VMungo1215G1674' => 'vmu', 'VMungo1215G3004' => 'vmu', 'VMungo1309G2366' => 'vmu', 'VMungo1383G0939' => 'vmu', 'VMungo1383G1426' => 'vmu', 'VMungo1383G1458' => 'vmu', 'Zm00001eb010810' => 'zma', 'Zm00001eb023450' => 'zma', 'Zm00001eb107040' => 'zma', 'Zm00001eb138130' => 'zma', 'Zm00001eb205980' => 'zma', 'Zm00001eb206130' => 'zma', 'Zm00001eb217800' => 'zma', 'Zm00001eb324440' => 'zma', 'Zm00001eb388040' => 'zma', 'Zm00001eb391380' => 'zma', 'Zm00001eb391390' => 'zma' ) $gf_id = 'HOM05D000528' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000528' ) $data_identifier = 'HOM05D000528' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 16, 'aar' => (int) 9, 'aag' => (int) 8, 'ach' => (int) 13, 'amhyb' => (int) 4, 'aly' => (int) 10, 'aox' => (int) 8, 'arhy' => (int) 21, 'ath' => (int) 8, 'atr' => (int) 9, 'acertr' => (int) 11, 'cqu' => (int) 14, 'bca' => (int) 16, 'bol' => (int) 9, 'bra' => (int) 9, 'can' => (int) 20, 'cansat' => (int) 6, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 19, 'cfa' => (int) 9, 'ccl' => (int) 7, 'cil' => (int) 9, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 14, 'cre' => (int) 3, 'csa' => (int) 6, 'camsi' => (int) 11, 'dca' => (int) 10, 'din' => (int) 14, 'dzi' => (int) 11, 'eca' => (int) 10, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 46, 'fve' => (int) 9, 'gma' => (int) 17, 'ghi' => (int) 31, 'gra' => (int) 13, 'vvi' => (int) 5, 'han' => (int) 13, 'cav' => (int) 11, 'hma' => (int) 6, 'vpl' => (int) 10, 'sun' => (int) 7, 'lal' => (int) 13, 'lonja' => (int) 13, 'lja' => (int) 9, 'lsa' => (int) 12, 'mes' => (int) 10, 'mpo' => (int) 3, 'mbi' => (int) 12, 'mco' => (int) 3, 'mdo' => (int) 17, 'mtr' => (int) 9, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 17, 'nnu' => (int) 9, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 8, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 20, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 14, 'pso' => (int) 12, 'qlo' => (int) 5, 'rch' => (int) 20, 'rsi' => (int) 11, 'sbr' => (int) 8, 'sbo' => (int) 10, 'sci' => (int) 7, 'sed' => (int) 9, 'sgi' => (int) 7, 'sas' => (int) 9, 'shi' => (int) 10, 'smo' => (int) 12, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 10, 'tha' => (int) 10, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 8, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 10, 'vmu' => (int) 14, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb391390' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1